JavaGenes, NASA Ames. Written largely by Al Globus

gov.nasa.javaGenes.forceFields
Class StillingerWeberSi

java.lang.Object
  extended bygov.nasa.javaGenes.forceFields.Potential
      extended bygov.nasa.javaGenes.forceFields.StillingerWeber
          extended bygov.nasa.javaGenes.forceFields.StillingerWeberSi
All Implemented Interfaces:
java.io.Serializable

public class StillingerWeberSi
extends StillingerWeber

See Also:
Serialized Form

Nested Class Summary
 
Nested classes inherited from class gov.nasa.javaGenes.forceFields.StillingerWeber
StillingerWeber.ChromosomeParametersData
 
Field Summary
 
Fields inherited from class gov.nasa.javaGenes.forceFields.StillingerWeber
a_index, A_index, a1_index, a2_index, alleles, alleleSetup, alpha_index, angleInterval, B_index, beta_index, bondLengthInterval, C_index, chromosome, cutoffInterval, cutoffs, delta_index, exponentInterval, factorInterval, flourineThreeBodyParametersIncrement, gamma_index, lambda_index, m_index, NotApplicable, numberOfThreeBodyParameters, numberOfTwoBodyParameters, p_index, q_index, setupComplete, specialThreeBodyParametersIncrement, theta0_index
 
Fields inherited from class gov.nasa.javaGenes.forceFields.Potential
STILLINGER_WEBER, TERSOFF
 
Constructor Summary
StillingerWeberSi()
           
 
Method Summary
protected  void formSetup()
           
protected  int[] getChromosomeArraySizes()
           
protected  void setupChromosomeFromPaper()
           
 
Methods inherited from class gov.nasa.javaGenes.forceFields.StillingerWeber
addSpecialThreeBody, addThreeBody, addToArraySizes, addTwoBody, calculateForce, calculateTwoBodyEnergy, canModel, cutoff, getAlleles, getChromosome, getCutoff, getCutoff, getCutoffTerm, getEnergy, getEnergy, getEnergy, getEnergy, getForce, getSpeciesIndex, getValue, hasThreeBody, hasTwoBody, lengthTerm, mustModel, mustModel, mustModel, need, noThreeTermParameters, setBondLengthInterval, setChromosome, setCutoff, setCutoff, setCutoff, setCutoff, setCutoffInterval, setExponentInterval, setFactorInterval, setIndices, setupAllelesAndChromosome, setValue
 
Methods inherited from class gov.nasa.javaGenes.forceFields.Potential
getEnergy, getEnergy, toString
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

StillingerWeberSi

public StillingerWeberSi()
Method Detail

getChromosomeArraySizes

protected int[] getChromosomeArraySizes()
Overrides:
getChromosomeArraySizes in class StillingerWeber

formSetup

protected void formSetup()
Overrides:
formSetup in class StillingerWeber

setupChromosomeFromPaper

protected void setupChromosomeFromPaper()
Overrides:
setupChromosomeFromPaper in class StillingerWeber

JavaGenes, NASA Ames. Written largely by Al Globus