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JavaGenes, NASA Ames. Written largely by Al Globus
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Hierarchy For All Packages
Package Hierarchies:
gov.nasa.alsUtility
,
gov.nasa.javaGenes.chemistry
,
gov.nasa.javaGenes.core
,
gov.nasa.javaGenes.core.HFC
,
gov.nasa.javaGenes.core.utility
,
gov.nasa.javaGenes.EOSscheduling
,
gov.nasa.javaGenes.EOSscheduling.HBSS
,
gov.nasa.javaGenes.evolvableDoubleList
,
gov.nasa.javaGenes.evolvableDoubleList.DeJongExperiment
,
gov.nasa.javaGenes.forceFields
,
gov.nasa.javaGenes.graph
,
gov.nasa.javaGenes.hillClimbing
,
gov.nasa.javaGenes.main
,
gov.nasa.javaGenes.permutation
,
gov.nasa.javaGenes.simulatedAnnealing
,
gov.nasa.javaGenes.weightNetwork
Class Hierarchy
class java.lang.Object
class gov.nasa.javaGenes.core.
AbstractCheckpointable
(implements gov.nasa.javaGenes.core.Checkpointable)
class gov.nasa.javaGenes.core.
Run
class gov.nasa.javaGenes.evolvableDoubleList.DeJongExperiment.
Run
class gov.nasa.javaGenes.forceFields.
RunChromosome
class gov.nasa.javaGenes.EOSscheduling.
runEOSscheduling
class gov.nasa.javaGenes.chemistry.
RunMolecule
class gov.nasa.javaGenes.permutation.
RunPermutation
class java.util.AbstractCollection (implements java.util.Collection)
class java.util.AbstractList (implements java.util.List)
class java.util.Vector (implements java.lang.Cloneable, java.util.List, java.util.RandomAccess, java.io.Serializable)
class gov.nasa.alsUtility.
ExtendedVector
class java.util.AbstractSet (implements java.util.Set)
class java.util.TreeSet (implements java.lang.Cloneable, java.io.Serializable, java.util.SortedSet)
class gov.nasa.alsUtility.
ExtendedTreeSet
(implements java.io.Serializable)
class gov.nasa.javaGenes.graph.
AcceptableSecondBrokenEdge
(implements gov.nasa.alsUtility.
Predicate
)
class gov.nasa.javaGenes.graph.
AcceptableSecondVertex
(implements gov.nasa.alsUtility.
Predicate
)
class gov.nasa.javaGenes.hillClimbing.
Accepter
(implements java.io.Serializable)
class gov.nasa.javaGenes.hillClimbing.
AcceptEqualOrBetter
class gov.nasa.javaGenes.simulatedAnnealing.
Accepter
class gov.nasa.javaGenes.hillClimbing.
AcceptImprovement
class gov.nasa.javaGenes.EOSscheduling.
AccessWindow
(implements java.io.Serializable)
class gov.nasa.javaGenes.forceFields.
Allele
(implements java.io.Serializable)
class gov.nasa.javaGenes.forceFields.
AlleleSetup
(implements java.io.Serializable)
class gov.nasa.javaGenes.forceFields.
AlleleTemplate
(implements java.io.Serializable)
class gov.nasa.alsUtility.
AmericanWireGauge
class gov.nasa.alsUtility.
And
(implements gov.nasa.alsUtility.
Predicate
)
class gov.nasa.javaGenes.graph.
apsp
class gov.nasa.javaGenes.chemistry.
Atom.ExtendedTypeKey
(implements java.io.Serializable)
class gov.nasa.javaGenes.core.
Breeder
(implements java.io.Serializable)
class gov.nasa.javaGenes.core.HFC.
Breeder
class gov.nasa.javaGenes.core.HFC.
SteadyStateDiscreteBreeder
class gov.nasa.javaGenes.hillClimbing.
Breeder
class gov.nasa.javaGenes.EOSscheduling.HBSS.
Breeder
class gov.nasa.javaGenes.simulatedAnnealing.
Breeder
class gov.nasa.javaGenes.core.
BreederElitist
class gov.nasa.javaGenes.core.
BreederSteadyState
class gov.nasa.javaGenes.core.
BreederWithTeachers
class gov.nasa.javaGenes.core.
BreederSteadyState2
class gov.nasa.alsUtility.
Brick3d
(implements java.io.Serializable)
class gov.nasa.alsUtility.
Brick3dWithSegments
class gov.nasa.javaGenes.graph.
BrokenEdge
(implements java.lang.Cloneable, gov.nasa.alsUtility.
Compatible
)
class gov.nasa.javaGenes.graph.
BrokenGraph
(implements java.lang.Cloneable)
class gov.nasa.javaGenes.core.
CandidatePopulation
class gov.nasa.javaGenes.core.
CandidateReporter
class gov.nasa.javaGenes.core.
ChangingWeightsObject
(implements java.io.Serializable)
class gov.nasa.javaGenes.core.
Checkpointer
(implements java.io.Serializable)
class gov.nasa.javaGenes.core.
ChildMaker
(implements java.lang.Cloneable, java.io.Serializable)
class gov.nasa.javaGenes.EOSscheduling.HBSS.
ChildMaker
class gov.nasa.javaGenes.evolvableDoubleList.
ChildMaker
class gov.nasa.javaGenes.evolvableDoubleList.
Crossover
class gov.nasa.javaGenes.evolvableDoubleList.
CrossoverOnePoint
class gov.nasa.javaGenes.evolvableDoubleList.
CrossoverOnePointEach
class gov.nasa.javaGenes.evolvableDoubleList.
CrossoverTwoPoints
class gov.nasa.javaGenes.evolvableDoubleList.
CrossoverTwoPointsEach
class gov.nasa.javaGenes.evolvableDoubleList.
CrossoverAdewaya
class gov.nasa.javaGenes.evolvableDoubleList.
CrossoverInterval
class gov.nasa.javaGenes.evolvableDoubleList.
CrossoverPickOne
class gov.nasa.javaGenes.evolvableDoubleList.
Mutation3parents
class gov.nasa.javaGenes.evolvableDoubleList.
MutationDelete
class gov.nasa.javaGenes.evolvableDoubleList.
MutationFixedStdDev
class gov.nasa.javaGenes.evolvableDoubleList.
MutationInsert
class gov.nasa.javaGenes.core.
ChildMakerChain
class gov.nasa.javaGenes.forceFields.
ChromosomeCrossover
class gov.nasa.javaGenes.forceFields.
ChromosomeArrayCrossover
class gov.nasa.javaGenes.forceFields.
ChromosomeIntervalCrossover
class gov.nasa.javaGenes.forceFields.
ChromosomeXoverWithMutation
class gov.nasa.javaGenes.forceFields.
ChromosomeMutation
class gov.nasa.javaGenes.forceFields.
Mutation3Parents
class gov.nasa.javaGenes.graph.
GraphGenerator
class gov.nasa.javaGenes.graph.GraphMutation
class gov.nasa.javaGenes.graph.
AddDirectedEdge
class gov.nasa.javaGenes.graph.
AddDirectedVertex
class gov.nasa.javaGenes.graph.
AddEdge
class gov.nasa.javaGenes.graph.
AddVertex
class gov.nasa.javaGenes.graph.
MutateEdge
class gov.nasa.javaGenes.graph.
MutateVertex
class gov.nasa.javaGenes.permutation.
PermutationChildMaker
class gov.nasa.javaGenes.permutation.
PermutationKCutMutation
class gov.nasa.javaGenes.permutation.
PermutationOrderMutation
class gov.nasa.javaGenes.EOSscheduling.
OrderMutation
class gov.nasa.javaGenes.EOSscheduling.
SqueakyWheelTournamentSwapMutation
class gov.nasa.javaGenes.EOSscheduling.
SqueakyWheelPlacedTSM
class gov.nasa.javaGenes.EOSscheduling.
SqueakyWheelShiftForward
class gov.nasa.javaGenes.permutation.
PermutationPositionCrossover
class gov.nasa.javaGenes.EOSscheduling.
PositionCrossover
class gov.nasa.javaGenes.EOSscheduling.
RandomChild
class gov.nasa.javaGenes.graph.
TwoVertexGraphCrossover
class gov.nasa.javaGenes.chemistry.
MoleculeTwoVertexCrossover
class gov.nasa.javaGenes.core.
ChildMakerChain.ChainElement
(implements java.io.Serializable)
class gov.nasa.javaGenes.core.
ChildMakerProvider
(implements java.io.Serializable)
class gov.nasa.javaGenes.core.
ChildMakerEvolvingProvider
class gov.nasa.javaGenes.core.
ChildMakerEvolvingProvider2
class gov.nasa.javaGenes.core.
ChildMakerProviderWeighted
class gov.nasa.javaGenes.evolvableDoubleList.
ChildMakerProviderRandom
(implements gov.nasa.javaGenes.core.
ChildMakerRandomCreator
)
class gov.nasa.javaGenes.evolvableDoubleList.
ChildMakerProviderRandomMutations
class gov.nasa.javaGenes.forceFields.
ChromosomeParameterValues
(implements java.io.Serializable)
class gov.nasa.javaGenes.forceFields.
AssumedParameters
(implements java.io.Serializable)
class gov.nasa.javaGenes.forceFields.
Immigrant
class gov.nasa.alsUtility.
CircularIntQueue
class gov.nasa.alsUtility.
ComparativeStatistics
(implements java.io.Serializable)
class gov.nasa.javaGenes.main.
compareTechniquesMain
class gov.nasa.alsUtility.
Constants
class gov.nasa.javaGenes.chemistry.
Constants
class gov.nasa.javaGenes.core.utility.
CoreUtility
class gov.nasa.javaGenes.core.
Debug
class gov.nasa.javaGenes.EOSscheduling.
Debug
class gov.nasa.javaGenes.permutation.
Debug
class gov.nasa.javaGenes.core.
DescendingWeightsComparator
(implements java.util.Comparator, java.io.Serializable)
class java.util.Dictionary
class java.util.Hashtable (implements java.lang.Cloneable, java.util.Map, java.io.Serializable)
class gov.nasa.alsUtility.
DataTable
(implements java.io.Serializable)
class gov.nasa.alsUtility.
KeyCounter
(implements java.io.Serializable)
class gov.nasa.alsUtility.
ManySamples
(implements java.io.Serializable)
class gov.nasa.javaGenes.graph.
DirectedGraph.SecondVertex
(implements gov.nasa.alsUtility.
Predicate
)
class gov.nasa.javaGenes.graph.
DissimilarEdgeCompatibleWithVertices
(implements gov.nasa.alsUtility.
Predicate
)
class gov.nasa.alsUtility.
Distribution
class gov.nasa.alsUtility.
RandomDistribution
class gov.nasa.alsUtility.
RandomGaussianDistribution
class gov.nasa.alsUtility.
DoubleInterval
(implements java.io.Serializable)
class gov.nasa.alsUtility.
DoublesList
class gov.nasa.javaGenes.EOSscheduling.
DutyCycleConstraint
(implements java.io.Serializable)
class gov.nasa.alsUtility.
EasyFile
class gov.nasa.javaGenes.chemistry.
Element
(implements java.io.Serializable)
class gov.nasa.javaGenes.EOSscheduling.
EOSModel
(implements java.io.Serializable)
class gov.nasa.alsUtility.
Error
class gov.nasa.javaGenes.core.
Evolvable
(implements java.lang.Cloneable, java.io.Serializable)
class gov.nasa.javaGenes.forceFields.
Chromosome
class gov.nasa.javaGenes.evolvableDoubleList.
EvolvableDoubleList
class gov.nasa.javaGenes.graph.
Graph
class gov.nasa.javaGenes.graph.
DirectedGraph
class gov.nasa.javaGenes.chemistry.
Molecule
class gov.nasa.javaGenes.chemistry.
Benzene
class gov.nasa.javaGenes.chemistry.
Purine
class gov.nasa.javaGenes.chemistry.
Pyridine
class gov.nasa.javaGenes.permutation.
PermutationEvolvable
class gov.nasa.javaGenes.EOSscheduling.
EOSschedulingEvolvable
class gov.nasa.javaGenes.evolvableDoubleList.
EvolvableDouble
(implements java.io.Serializable)
class gov.nasa.javaGenes.evolvableDoubleList.DeJongExperiment.
ExperimentMain
class gov.nasa.alsUtility.
FieldRecordText
class gov.nasa.javaGenes.main.
FindMinimumInTsdFile
class gov.nasa.javaGenes.core.
Fitness
(implements java.io.Serializable)
class gov.nasa.javaGenes.core.
FitnessBad
class gov.nasa.javaGenes.core.
FitnessDouble
class gov.nasa.javaGenes.core.
FitnessMultiObjective
class gov.nasa.javaGenes.core.
StudentFitness
class gov.nasa.javaGenes.core.
FitnessFunction
(implements java.io.Serializable)
class gov.nasa.javaGenes.core.
ChangeFunctionByGeneration
class gov.nasa.javaGenes.forceFields.
ChromosomeDistanceFitness
class gov.nasa.javaGenes.graph.
CyclesSimilarity
class gov.nasa.javaGenes.evolvableDoubleList.
DeJongFitnessFunctions
class gov.nasa.javaGenes.graph.
ExtendedTypeSimilarity
class gov.nasa.javaGenes.forceFields.
FirstClusterLowestEnergyFitnessFunction
class gov.nasa.javaGenes.core.
FitnessFunctionBadSize
class gov.nasa.javaGenes.core.
FitnessFunctionFixed
class gov.nasa.javaGenes.core.
FitnessFunctionMultiObjective
class gov.nasa.javaGenes.core.
FitnessFunctionMultiObjectiveToOne
class gov.nasa.javaGenes.core.
MultiStageFitnessFunction
class gov.nasa.javaGenes.core.
ProductFitnessFunction
class gov.nasa.javaGenes.core.
WeightedSumFitness
class gov.nasa.javaGenes.core.
StudentFitnessFunction
class gov.nasa.javaGenes.core.
FitnessFunctionRandom
class gov.nasa.javaGenes.core.
FitnessFunctionWorstFitness
class gov.nasa.javaGenes.core.
FitnessFunctionWorstFitnessManyTries
class gov.nasa.javaGenes.forceFields.
LowestToHighestEnergyFitness
class gov.nasa.javaGenes.forceFields.
LowestToHighestEnergyGradualFitness
class gov.nasa.javaGenes.forceFields.
ManyMoleculesEnergyFitness
class gov.nasa.javaGenes.forceFields.
ForceFitnessRMS
class gov.nasa.javaGenes.forceFields.
ForceFitnessTanimoto
class gov.nasa.javaGenes.forceFields.
ManyMoleculesEnergyFitnessRatio
class gov.nasa.javaGenes.forceFields.
ManyMoleculesEnergyFitnessTanimotoDistance
class gov.nasa.javaGenes.forceFields.
MMEFreferenceRMS
class gov.nasa.javaGenes.forceFields.
MMEFreferenceTanimoto
class gov.nasa.javaGenes.core.
ParsimonyFitness
class gov.nasa.javaGenes.permutation.
PermutationTestFitness
class gov.nasa.javaGenes.forceFields.
PotentialEnergyFitness
class gov.nasa.javaGenes.EOSscheduling.
SchedulingFitnessFunction
class gov.nasa.javaGenes.EOSscheduling.
MinimizeSlewingFitness
class gov.nasa.javaGenes.EOSscheduling.
NumberOfTakeImagesFitness
class gov.nasa.javaGenes.EOSscheduling.
SmallSlewsFitness
class gov.nasa.javaGenes.EOSscheduling.
TaskPriorityFitness
class gov.nasa.javaGenes.core.
TeacherFitnessFunction
class gov.nasa.javaGenes.evolvableDoubleList.
TestFitnessFunction1
class gov.nasa.javaGenes.graph.
VertexPairsDistanceSimilarity
class gov.nasa.javaGenes.core.
Weighted0to1
class gov.nasa.javaGenes.forceFields.
FunctionalForm
(implements java.io.Serializable)
class gov.nasa.javaGenes.forceFields.
GetLengthsAndAngles
class gov.nasa.javaGenes.graph.
Graph.TrailKey
(implements java.io.Serializable)
class gov.nasa.javaGenes.graph.
GraphLayout
(implements java.io.Serializable)
class gov.nasa.javaGenes.graph.
GraphLayout.CoordinateProvider
class gov.nasa.alsUtility.
GrowOnlyArray
(implements java.io.Serializable)
class gov.nasa.javaGenes.weightNetwork.
UpdateAndPropagateList
(implements java.io.Serializable)
class gov.nasa.javaGenes.graph.
HasInputEdgeFrom
(implements gov.nasa.alsUtility.
Predicate
)
class gov.nasa.javaGenes.graph.
HasOutputEdgesTo
(implements gov.nasa.alsUtility.
Predicate
)
class gov.nasa.javaGenes.forceFields.
Immigrants
(implements java.io.Serializable)
class gov.nasa.alsUtility.
IncrementIterator
(implements java.io.Serializable)
class gov.nasa.alsUtility.
IndexIterator
(implements java.io.Serializable)
class gov.nasa.javaGenes.evolvableDoubleList.
Indices
(implements java.io.Serializable)
class gov.nasa.javaGenes.core.
Individual
(implements java.io.Serializable)
class gov.nasa.javaGenes.forceFields.
ChromosomeIndividual
class gov.nasa.javaGenes.graph.
GraphIndividual
class gov.nasa.javaGenes.chemistry.
MoleculeIndividual
class gov.nasa.javaGenes.permutation.
PermutationIndividual
class gov.nasa.javaGenes.EOSscheduling.
EOSschedulingIndividual
class gov.nasa.alsUtility.
integer
(implements java.io.Serializable)
class gov.nasa.alsUtility.
IntegerInterval
(implements java.io.Serializable)
class gov.nasa.alsUtility.
IO
class gov.nasa.alsUtility.
IsEqual
(implements gov.nasa.alsUtility.
Predicate
)
class gov.nasa.alsUtility.
IsInstanceOf
(implements gov.nasa.alsUtility.
Predicate
)
class gov.nasa.alsUtility.
IsMarked
(implements gov.nasa.alsUtility.
Predicate
)
class gov.nasa.javaGenes.main.
LatticeConstantEnergies
class gov.nasa.alsUtility.
LogComparisons
(implements java.io.Serializable)
class gov.nasa.alsUtility.
LogFile
class gov.nasa.javaGenes.evolvableDoubleList.DeJongExperiment.
Main
class gov.nasa.javaGenes.forceFields.
Main
class gov.nasa.javaGenes.forceFields.
MakeDimer
class gov.nasa.javaGenes.forceFields.
MakeDimerPair
class gov.nasa.javaGenes.forceFields.
MakeSiFMolecules
class gov.nasa.javaGenes.forceFields.
MakeThreeBodyXyz
class gov.nasa.javaGenes.forceFields.
MakeTrimer
class gov.nasa.javaGenes.forceFields.
ManyMultiBodiesForOneEnergy
(implements java.io.Serializable)
class gov.nasa.alsUtility.
Mark
class gov.nasa.javaGenes.graph.
GraphElement
(implements java.lang.Cloneable, java.io.Serializable)
class gov.nasa.javaGenes.graph.
Edge
(implements gov.nasa.alsUtility.
Compatible
)
class gov.nasa.javaGenes.chemistry.
Bond
class gov.nasa.javaGenes.graph.
DirectedEdge
class gov.nasa.javaGenes.graph.
Vertex
class gov.nasa.javaGenes.chemistry.
Atom
class gov.nasa.javaGenes.graph.
DirectedVertex
class gov.nasa.alsUtility.
MarkIsSet
(implements gov.nasa.alsUtility.
Predicate
)
class gov.nasa.alsUtility.
MathUtility
class gov.nasa.alsUtility.
Matrix3d
(implements java.io.Serializable)
class gov.nasa.alsUtility.
MinMaxes
class gov.nasa.javaGenes.chemistry.
MoleculeLayout
class gov.nasa.javaGenes.chemistry.
MoleculeMain
class gov.nasa.javaGenes.chemistry.
Molecules
class gov.nasa.javaGenes.chemistry.
molFormat
class gov.nasa.javaGenes.forceFields.
MultiBodiesForOneEnergy
(implements java.lang.Cloneable, java.io.Serializable)
class gov.nasa.javaGenes.forceFields.
Bodies
class gov.nasa.javaGenes.forceFields.
MultiBody
(implements java.lang.Cloneable, java.io.Serializable)
class gov.nasa.javaGenes.forceFields.
Body
class gov.nasa.javaGenes.forceFields.
OneBody
class gov.nasa.javaGenes.forceFields.
SecondBody
class gov.nasa.javaGenes.forceFields.
ThirdBody
class gov.nasa.javaGenes.forceFields.
ThreeBody
class gov.nasa.javaGenes.forceFields.
TwoBody
class gov.nasa.javaGenes.EOSscheduling.
NodeFactory
(implements java.io.Serializable)
class gov.nasa.alsUtility.
Not
(implements gov.nasa.alsUtility.
Predicate
)
class gov.nasa.alsUtility.
ObjectCache
(implements java.io.Serializable)
class gov.nasa.alsUtility.
ObjectCompatible
(implements gov.nasa.alsUtility.
Predicate
)
class gov.nasa.alsUtility.
ObjectEquals
(implements gov.nasa.alsUtility.
Predicate
)
class gov.nasa.alsUtility.
Or
(implements gov.nasa.alsUtility.
Predicate
)
class gov.nasa.javaGenes.core.
Parameters
(implements java.io.Serializable)
class gov.nasa.javaGenes.forceFields.
ChromosomeParameters
class gov.nasa.javaGenes.graph.
GraphParameters
(implements java.io.Serializable)
class gov.nasa.javaGenes.chemistry.
MoleculeParameters
class gov.nasa.javaGenes.evolvableDoubleList.DeJongExperiment.
Parameters
class gov.nasa.javaGenes.permutation.
PermutationParameters
class gov.nasa.javaGenes.EOSscheduling.
EOSschedulingParameters
class gov.nasa.javaGenes.core.utility.
Parameters2tsd
class gov.nasa.javaGenes.core.utility.
MakeSeeds
class gov.nasa.javaGenes.core.utility.
ParametersAndLog2tsd
class gov.nasa.javaGenes.core.
PhenotypeChangerDummy
(implements gov.nasa.javaGenes.core.
PhenotypeChanger
)
class gov.nasa.javaGenes.EOSscheduling.
Placer
(implements java.io.Serializable)
class gov.nasa.javaGenes.EOSscheduling.
EarliestFirstPlacer
class gov.nasa.javaGenes.EOSscheduling.
EarliestFromChosenWindowPlacer
class gov.nasa.javaGenes.EOSscheduling.
EarliestFromRandomWindowPlacer
class gov.nasa.javaGenes.EOSscheduling.
PointingRequirement
(implements java.io.Serializable)
class gov.nasa.javaGenes.core.
Population
(implements java.io.Serializable)
class gov.nasa.javaGenes.forceFields.
ChromosomePopulation
class gov.nasa.javaGenes.core.
TeacherPopulation
class gov.nasa.javaGenes.EOSscheduling.
EOSschedulingPopulation
class gov.nasa.javaGenes.graph.
GraphPopulation
class gov.nasa.javaGenes.chemistry.
MoleculePopulation
class gov.nasa.javaGenes.permutation.
PermutationPopulation
class gov.nasa.javaGenes.forceFields.
Potential
class gov.nasa.javaGenes.forceFields.
StillingerWeber
(implements java.io.Serializable)
class gov.nasa.javaGenes.forceFields.
StillingerWeberSi
class gov.nasa.javaGenes.forceFields.
StillingerWeberSiF
class gov.nasa.javaGenes.forceFields.
StillingerWeberPartialSiF
class gov.nasa.javaGenes.forceFields.
Tersoff
class gov.nasa.javaGenes.forceFields.
PotentialEnergyTestCase
class gov.nasa.alsUtility.
PropertiesList
class gov.nasa.javaGenes.forceFields.
PutPotentialEnergiesAndForces
(implements java.io.Serializable)
class gov.nasa.alsUtility.
Quat4d
(implements java.io.Serializable)
class gov.nasa.javaGenes.core.
RandomEvolvableProducer
(implements java.io.Serializable)
class gov.nasa.javaGenes.evolvableDoubleList.
RandomEvolvableDoubleListProducer
class gov.nasa.javaGenes.chemistry.
randomizeManyMolecules
class gov.nasa.javaGenes.chemistry.
randomizeXYZ
class gov.nasa.alsUtility.
RandomNumber
class gov.nasa.alsUtility.
ReinitializableFloat
(implements java.io.Serializable)
class gov.nasa.alsUtility.
ReinitializableFloatWithFactor
class gov.nasa.alsUtility.
ReinitializableInt
(implements java.io.Serializable)
class gov.nasa.javaGenes.core.
Reporter
(implements java.io.Serializable)
class gov.nasa.javaGenes.forceFields.
ChromosomeReporter
class gov.nasa.javaGenes.EOSscheduling.
EOSschedulingReporter
class gov.nasa.javaGenes.hillClimbing.
RestartPolicy
(implements java.io.Serializable)
class gov.nasa.javaGenes.hillClimbing.
RestartEveryNChildren
class gov.nasa.javaGenes.hillClimbing.
RestartAfterNChildrenWithoutAcceptance
class gov.nasa.javaGenes.hillClimbing.
RestartAfterNChildrenWithoutImprovement
class gov.nasa.javaGenes.hillClimbing.
RestartNever
class gov.nasa.alsUtility.
RootMeanSquares
class gov.nasa.javaGenes.core.
RouletteWheel
(implements java.io.Serializable)
class gov.nasa.alsUtility.
Sample
(implements java.io.Serializable)
class gov.nasa.javaGenes.EOSscheduling.
Satellite
(implements java.io.Serializable)
class gov.nasa.alsUtility.
Saver
(implements java.io.Serializable)
class gov.nasa.javaGenes.EOSscheduling.
Scheduler
(implements java.io.Serializable)
class gov.nasa.javaGenes.EOSscheduling.HBSS.
Scheduler
class gov.nasa.javaGenes.EOSscheduling.
SchedulingData
(implements java.io.Serializable)
class gov.nasa.javaGenes.evolvableDoubleList.
Selector
(implements java.io.Serializable)
class gov.nasa.javaGenes.evolvableDoubleList.
NeighboringPairsSelector
class gov.nasa.javaGenes.evolvableDoubleList.
SelectOneNeighboringPair
class gov.nasa.javaGenes.evolvableDoubleList.
SelectTwoNeighboringPairs
class gov.nasa.javaGenes.evolvableDoubleList.
SelectAll
class gov.nasa.javaGenes.evolvableDoubleList.
SelectByProbability
class gov.nasa.javaGenes.evolvableDoubleList.
SelectChunk
class gov.nasa.javaGenes.evolvableDoubleList.
SelectFixedIndices
class gov.nasa.javaGenes.evolvableDoubleList.
SelectFixedNumber
class gov.nasa.javaGenes.evolvableDoubleList.
SelectModulo
class gov.nasa.javaGenes.evolvableDoubleList.
SelectOne
class gov.nasa.javaGenes.EOSscheduling.
Sensor
(implements java.io.Serializable)
class gov.nasa.javaGenes.EOSscheduling.
SensorType
(implements java.io.Serializable)
class gov.nasa.alsUtility.
SetMark
(implements gov.nasa.alsUtility.
Procedure
)
class gov.nasa.javaGenes.EOSscheduling.
Slewable
(implements java.io.Serializable)
class gov.nasa.javaGenes.EOSscheduling.
SlewMotor
class gov.nasa.javaGenes.EOSscheduling.
SlewMotorNone
class gov.nasa.javaGenes.EOSscheduling.
SlewRequirement
(implements java.io.Serializable)
class gov.nasa.javaGenes.EOSscheduling.
CrossTrackSlew
class gov.nasa.javaGenes.EOSscheduling.
SlewNone
class gov.nasa.javaGenes.forceFields.
Species
class gov.nasa.javaGenes.forceFields.
AtomicSpecies
class gov.nasa.javaGenes.forceFields.
Species2IndexMap
class gov.nasa.javaGenes.forceFields.
StillingerWeber.ChromosomeParametersData
(implements java.io.Serializable)
class gov.nasa.javaGenes.forceFields.
StillingerWeberEnergies
class gov.nasa.javaGenes.forceFields.
StillingerWeberPrintEnergiesAndForces
class gov.nasa.javaGenes.EOSscheduling.
STKAccessFile
(implements java.io.Serializable)
class gov.nasa.javaGenes.core.HFC.
SubBreeder
(implements java.io.Serializable)
class gov.nasa.javaGenes.core.HFC.
BottomSubBreeder
class gov.nasa.javaGenes.core.HFC.
MiddleSubBreeder
class gov.nasa.javaGenes.core.HFC.
TopSubBreeder
class gov.nasa.alsUtility.
Tanimoto
class gov.nasa.javaGenes.EOSscheduling.
Task
(implements java.io.Serializable)
class gov.nasa.javaGenes.EOSscheduling.
TakeImage
class gov.nasa.javaGenes.EOSscheduling.
TaskAndAccessWindowGenerator
(implements java.io.Serializable)
class gov.nasa.javaGenes.EOSscheduling.
TaskPlacementData
(implements java.io.Serializable)
class TestCase
class gov.nasa.alsUtility.
WeightedStatisticsTest
class TestCase
class gov.nasa.alsUtility.
Vector3dTest
class junit.framework.TestCase
class gov.nasa.alsUtility.
VecMathTest
class TestCase
class gov.nasa.alsUtility.
UtilityTest
class TestCase
class gov.nasa.alsUtility.
SampleTest
class TestCase
class gov.nasa.alsUtility.
RootMeanSquaresTest
class TestCase
class gov.nasa.alsUtility.
ReinitializableIntTest
class TestCase
class gov.nasa.alsUtility.
ReinitializableFloatWithFactorTest
class TestCase
class gov.nasa.alsUtility.
ReinitializableFloatTest
class TestCase
class gov.nasa.alsUtility.
RandomNumberTest
class TestCase
class gov.nasa.alsUtility.
PropertiesListTest
class TestCase
class gov.nasa.alsUtility.
ObjectCacheTest
class TestCase
class gov.nasa.alsUtility.
MinMaxesTest
class TestCase
class gov.nasa.alsUtility.
MathUtilityTest
class TestCase
class gov.nasa.alsUtility.
LogComparisonsTest
class TestCase
class gov.nasa.alsUtility.
KeyCounterTest
class TestCase
class gov.nasa.alsUtility.
IOTest
class TestCase
class gov.nasa.alsUtility.
IntegerIntervalTest
class TestCase
class gov.nasa.alsUtility.
GrowOnlyArrayTest
class TestCase
class gov.nasa.alsUtility.
FieldRecordTextTest
class TestCase
class gov.nasa.alsUtility.
ExtendedVectorTest
class TestCase
class gov.nasa.alsUtility.
ExtendedTreeSetTest
class TestCase
class gov.nasa.alsUtility.
DoublesListTest
class TestCase
class gov.nasa.alsUtility.
DoubleIntervalTest
class TestCase
class gov.nasa.alsUtility.
ComparativeStatisticsTest
class TestCase
class gov.nasa.alsUtility.
Brick3dWithSegmentsTest
class TestCase
class gov.nasa.alsUtility.
Brick3dTest
class TestCase
class gov.nasa.alsUtility.
AmericanWireGaugeTest
class TestCase
class gov.nasa.javaGenes.chemistry.
UnitCellTest
class TestCase
class gov.nasa.javaGenes.chemistry.
MoleculeTest
class TestCase
class gov.nasa.javaGenes.chemistry.
AtomTest
class TestCase
class gov.nasa.javaGenes.core.
WeightedSumFitnessTest
class TestCase
class gov.nasa.javaGenes.core.
TournamentTest
class TestCase
class gov.nasa.javaGenes.core.
TournamentLocalTest
class TestCase
class gov.nasa.javaGenes.core.
StudentTeacherTest
class TestCase
class gov.nasa.javaGenes.core.
RouletteWheelTest
class TestCase
class gov.nasa.javaGenes.core.
ProductFitnessFunctionTest
class TestCase
class gov.nasa.javaGenes.core.
PopulationTest
class TestCase
class gov.nasa.javaGenes.core.
ParametersSerializationTest
class TestCase
class gov.nasa.javaGenes.core.
MultiStageFitnessFunctionTest
class TestCase
class gov.nasa.javaGenes.core.
FitnessMultiObjectiveTest
class TestCase
class gov.nasa.javaGenes.core.
FitnessFunctionWorstFitnessTest
class TestCase
class gov.nasa.javaGenes.core.
FitnessFunctionWorstFitnessManyTriesTest
class TestCase
class gov.nasa.javaGenes.core.
FitnessFunctionBadSizeTest
class TestCase
class gov.nasa.javaGenes.core.
EvolvableTest
class TestCase
class gov.nasa.javaGenes.core.
DescendingWeightsComparatorTest
class TestCase
class gov.nasa.javaGenes.core.
ChildMakerTest
class TestCase
class gov.nasa.javaGenes.core.
ChildMakerProviderTest
class TestCase
class gov.nasa.javaGenes.core.
ChildMakerEvolvingProviderTest
class TestCase
class gov.nasa.javaGenes.core.
ChildMakerEvolvingProvider2Test
class TestCase
class gov.nasa.javaGenes.core.
ChildMakerDownFractionComparatorTest
class TestCase
class gov.nasa.javaGenes.core.
ChangingWeightsObjectTest
class TestCase
class gov.nasa.javaGenes.core.
ChangeFunctionByGenerationTest
class TestCase
class gov.nasa.javaGenes.core.
AntiTournamentTest
class TestCase
class gov.nasa.javaGenes.core.
AntiTournamentLocalTest
class TestCase
class gov.nasa.javaGenes.core.HFC.
SteadyStateDiscreteBreederTest
class TestCase
class gov.nasa.javaGenes.core.utility.
CoreUtilityTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
TimelineTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
TaskTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
TaskAndAccessWindowGeneratorTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
STKAccessFileTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
SSRTimelineTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
SSRNodeTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
SqueakyWheelTournamentSwapMutationTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
SqueakyWheelShiftForwardTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
SqueakyWheelPlacedTSMTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
SlewTimelineTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
SlewMotorTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
SensorTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
PointingRequirementTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
NodeTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
NodeArrayTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
HorizonTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
EOSschedulingEvolvableTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
EOSModelTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
EarliestFirstPlacerTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
DutyCycleConstraintTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
CrossTrackSlewTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
AvailableNodeTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
AvailabilityTimelineTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.
AccessWindowTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.HBSS.
TaskWeightTest
class TestCase
class gov.nasa.javaGenes.EOSscheduling.HBSS.
SchedulerTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
SelectTwoNeighboringPairsTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
SelectOneTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
SelectOneNeighboringPairTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
SelectModuloTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
SelectFixedNumberTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
SelectFixedIndicesTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
SelectChunkTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
SelectByProbabilityTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
SelectAllTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
MutationInsertTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
MutationFixedStdDevTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
MutationDeleteTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
Mutation3parentsTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
IndicesTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
EvolvableDoubleTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
EvolvableDoubleListTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
DeJongFitnessFunctionsTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
CrossoverTwoPointsTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
CrossoverTwoPointsEachTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
CrossoverTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
CrossoverPickOneTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
CrossoverOnePointTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
CrossoverOnePointEachTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
CrossoverIntervalTest
class TestCase
class gov.nasa.javaGenes.evolvableDoubleList.
CrossoverAdewayaTest
class TestCase
class gov.nasa.javaGenes.forceFields.
TwoBodyTest
class TestCase
class gov.nasa.javaGenes.forceFields.
ThreeBodyTest
class TestCase
class gov.nasa.javaGenes.forceFields.
TersoffTest
class TestCase
class gov.nasa.javaGenes.forceFields.
StillingerWeberTest
class TestCase
class gov.nasa.javaGenes.forceFields.
StillingerWeberSiTest
class TestCase
class gov.nasa.javaGenes.forceFields.
StillingerWeberSiFTest
class TestCase
class gov.nasa.javaGenes.forceFields.
MultiBodiesForOneEnergyTest
class TestCase
class gov.nasa.javaGenes.forceFields.
MMEFreferenceRMSTest
class TestCase
class gov.nasa.javaGenes.forceFields.
LowestToHighestEnergyGradualFitnessTest
class TestCase
class gov.nasa.javaGenes.forceFields.
LowestToHighestEnergyFitnessTest
class TestCase
class gov.nasa.javaGenes.forceFields.
ImmigrantTest
class TestCase
class gov.nasa.javaGenes.forceFields.
ImmigrantsTest
class TestCase
class gov.nasa.javaGenes.forceFields.
ForceFitnessRMSTest
class TestCase
class gov.nasa.javaGenes.forceFields.
FirstClusterLowestEnergyFitnessFunctionTest
class TestCase
class gov.nasa.javaGenes.forceFields.
ChromosomeXoverWithMutationTest
class TestCase
class gov.nasa.javaGenes.forceFields.
ChromosomeMutationTest
class TestCase
class gov.nasa.javaGenes.forceFields.
ChromosomeIntervalCrossoverTest
class TestCase
class gov.nasa.javaGenes.forceFields.
BodiesTest
class TestCase
class gov.nasa.javaGenes.forceFields.
AssumedParametersTest
class TestCase
class gov.nasa.javaGenes.forceFields.
AlleleTest
class TestCase
class gov.nasa.javaGenes.forceFields.
AlleleTemplateTest
class TestCase
class gov.nasa.javaGenes.graph.
VertexTest
class TestCase
class gov.nasa.javaGenes.graph.
GraphTest
class TestCase
class gov.nasa.javaGenes.hillClimbing.
RestartEveryNChildrenTest
class TestCase
class gov.nasa.javaGenes.hillClimbing.
RestartAfterNChildrenWithoutImprovementTest
class TestCase
class gov.nasa.javaGenes.hillClimbing.
RestartAfterNChildrenWithoutAcceptanceTest
class TestCase
class gov.nasa.javaGenes.hillClimbing.
AcceptImprovementTest
class TestCase
class gov.nasa.javaGenes.hillClimbing.
AcceptEqualOrBetterTest
class TestCase
class gov.nasa.javaGenes.permutation.
PermutationPositionCrossoverTest
class TestCase
class gov.nasa.javaGenes.permutation.
PermutationOrderMutationTest
class TestCase
class gov.nasa.javaGenes.permutation.
PermutationKCutMutationTest
class TestCase
class gov.nasa.javaGenes.simulatedAnnealing.
AccepterTest
class TestCase
class gov.nasa.javaGenes.weightNetwork.
WeightListTest
class TestCase
class gov.nasa.javaGenes.weightNetwork.
RouletteWheelTest
class TestCase
class gov.nasa.javaGenes.weightNetwork.
RouletteWheelChooseLowWeightTest
class TestSuite
class gov.nasa.alsUtility.
AllTests
class java.lang.Thread (implements java.lang.Runnable)
class gov.nasa.javaGenes.core.
PeriodicCheckpoints
class java.lang.Throwable (implements java.io.Serializable)
class java.lang.Exception
class gov.nasa.javaGenes.core.
NotFoundException
class gov.nasa.javaGenes.EOSscheduling.
TimeInterval
(implements java.io.Serializable)
class gov.nasa.javaGenes.EOSscheduling.
Horizon
class gov.nasa.javaGenes.EOSscheduling.
Node
class gov.nasa.javaGenes.EOSscheduling.
AvailableNode
class gov.nasa.javaGenes.EOSscheduling.
SlewNode
class gov.nasa.javaGenes.EOSscheduling.
SSRNode
class gov.nasa.javaGenes.EOSscheduling.
Timeline
(implements java.io.Serializable)
class gov.nasa.javaGenes.EOSscheduling.
AvailabilityTimeline
class gov.nasa.javaGenes.EOSscheduling.
SlewTimeline
class gov.nasa.javaGenes.EOSscheduling.
SlewTimelineNone
class gov.nasa.javaGenes.EOSscheduling.
SSRTimeline
class gov.nasa.javaGenes.EOSscheduling.
SSRTimelineNone
class gov.nasa.alsUtility.
Timer
(implements java.io.Serializable)
class gov.nasa.javaGenes.core.
TokenizeInput
class gov.nasa.javaGenes.core.
TokenizeOutput
class gov.nasa.javaGenes.core.
Tournament
(implements gov.nasa.javaGenes.core.
ChooseParents
)
class gov.nasa.javaGenes.core.
AntiTournament
(implements gov.nasa.javaGenes.core.
ChooseForDeath
)
class gov.nasa.javaGenes.core.
AntiTournamentLocal
class gov.nasa.javaGenes.core.
TournamentLocal
class gov.nasa.javaGenes.graph.
Trail
(implements java.lang.Cloneable)
class gov.nasa.javaGenes.chemistry.
UnitCell
(implements java.io.Serializable)
class gov.nasa.javaGenes.chemistry.
UnitCellNone
class gov.nasa.javaGenes.weightNetwork.
UpdateAndPropagatable
(implements java.io.Serializable)
class gov.nasa.javaGenes.weightNetwork.
Weight
class gov.nasa.javaGenes.EOSscheduling.HBSS.
AccessWindowWeight
class gov.nasa.javaGenes.EOSscheduling.HBSS.
TaskWeight
class gov.nasa.javaGenes.weightNetwork.
WeightList
class gov.nasa.javaGenes.weightNetwork.
RouletteWheel
class gov.nasa.javaGenes.EOSscheduling.HBSS.
TaskList
class gov.nasa.javaGenes.weightNetwork.
RouletteWheelChooseLowWeight
class gov.nasa.javaGenes.EOSscheduling.HBSS.
AccessWindowsList
class gov.nasa.alsUtility.
Utility
class gov.nasa.alsUtility.
Vector3d
(implements java.io.Serializable)
class gov.nasa.alsUtility.
VectorIterator
(implements gov.nasa.alsUtility.
Iterator
)
class gov.nasa.javaGenes.graph.
EdgeIterator
class gov.nasa.javaGenes.graph.
VertexIterator
class gov.nasa.javaGenes.graph.
VertexAcceptsEdge
(implements gov.nasa.alsUtility.
Predicate
)
class gov.nasa.javaGenes.graph.
VertexAcceptsInputEdge
(implements gov.nasa.alsUtility.
Predicate
)
class gov.nasa.javaGenes.graph.
VertexAcceptsOutputEdge
(implements gov.nasa.alsUtility.
Predicate
)
class gov.nasa.javaGenes.graph.
VertexAndEdgeProvider
(implements java.io.Serializable)
class gov.nasa.javaGenes.graph.
VertexAndTrailIterator
class gov.nasa.alsUtility.
VRMLUtility
class gov.nasa.alsUtility.
WeightedStatistics
(implements java.io.Serializable)
class java.io.Writer
class java.io.PrintWriter
class gov.nasa.alsUtility.
PrintTabSeparatedData
class gov.nasa.javaGenes.chemistry.
xyzFormat
Interface Hierarchy
interface gov.nasa.javaGenes.core.
ChildMakerRandomCreator
interface gov.nasa.alsUtility.
Compatible
interface gov.nasa.alsUtility.
Iterator
interface gov.nasa.alsUtility.
Procedure
interface java.io.Serializable
interface gov.nasa.javaGenes.core.
ChooseForDeath
interface gov.nasa.javaGenes.core.
ChooseParents
interface gov.nasa.javaGenes.core.
PhenotypeChanger
interface gov.nasa.alsUtility.
Predicate
Overview
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JavaGenes, NASA Ames. Written largely by Al Globus
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