JavaGenes, NASA Ames. Written largely by Al Globus

gov.nasa.javaGenes.chemistry
Class MoleculeParameters

java.lang.Object
  extended bygov.nasa.javaGenes.core.Parameters
      extended bygov.nasa.javaGenes.graph.GraphParameters
          extended bygov.nasa.javaGenes.chemistry.MoleculeParameters
All Implemented Interfaces:
java.io.Serializable

public class MoleculeParameters
extends GraphParameters

See Also:
Serialized Form

Field Summary
 
Fields inherited from class gov.nasa.javaGenes.graph.GraphParameters
cyclesInterval, layout, layoutGraph2d, provider, verticesInterval
 
Fields inherited from class gov.nasa.javaGenes.core.Parameters
breeder, childMakerProvider, evaluationFunction, fitnessFunction, frequencyOfASCIIPopulations, kidsPerGeneration, logBestEvolvableEachGeneration, maximumGenerations, paretoFitness, populationSize, randomIndividualTriesPerSpecification, reportVariationOperatorPerformanceEachGeneration, separateLogAndEvolvableFiles, SEPARATOR, stopAtPerfection, stopFile, suspendFile, suspendTime, tournamentProbability
 
Constructor Summary
MoleculeParameters()
          Sets up all parameters with a default target graph.
MoleculeParameters(Molecule target)
          Sets up all parameters with target Graph target
MoleculeParameters(java.lang.String filename)
          Sets up all parameters with a target molecule read from a mol file.
 
Methods inherited from class gov.nasa.javaGenes.core.Parameters
makeFiles, toString
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

MoleculeParameters

public MoleculeParameters()
Sets up all parameters with a default target graph.


MoleculeParameters

public MoleculeParameters(java.lang.String filename)
Sets up all parameters with a target molecule read from a mol file. Must be a molecule.

See Also:
molFormat

MoleculeParameters

public MoleculeParameters(Molecule target)
Sets up all parameters with target Graph target


JavaGenes, NASA Ames. Written largely by Al Globus