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JavaGenes, NASA Ames. Written largely by Al Globus | |||||||||
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java.lang.Objectgov.nasa.javaGenes.core.FitnessFunction
gov.nasa.javaGenes.forceFields.LowestToHighestEnergyFitness
gov.nasa.javaGenes.forceFields.LowestToHighestEnergyGradualFitness
Field Summary | |
protected double |
outOfOrderPenalty
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Fields inherited from class gov.nasa.javaGenes.forceFields.LowestToHighestEnergyFitness |
doPerAtomEnergies, filename, molecules, potential |
Fields inherited from class gov.nasa.javaGenes.core.FitnessFunction |
name |
Constructor Summary | |
protected |
LowestToHighestEnergyGradualFitness()
for testing only |
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LowestToHighestEnergyGradualFitness(Potential p,
ManyMultiBodiesForOneEnergy m)
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Method Summary | |
protected double |
outOfOrder(double[] energy)
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void |
setOutOfOrderPenalty(double inOutOfOrderPenalty)
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Methods inherited from class gov.nasa.javaGenes.forceFields.LowestToHighestEnergyFitness |
evaluateFitness, getFilename, report, setDoPerAtomEnergies, setFilename, toString |
Methods inherited from class gov.nasa.javaGenes.core.FitnessFunction |
bestDouble, getFunction, getName, getNameArray, isNewFunction, makeFiles, numberOfObjectives, setName, worstDouble |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Field Detail |
protected double outOfOrderPenalty
Constructor Detail |
protected LowestToHighestEnergyGradualFitness()
public LowestToHighestEnergyGradualFitness(Potential p, ManyMultiBodiesForOneEnergy m)
Method Detail |
protected double outOfOrder(double[] energy)
outOfOrder
in class LowestToHighestEnergyFitness
public void setOutOfOrderPenalty(double inOutOfOrderPenalty)
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JavaGenes, NASA Ames. Written largely by Al Globus | |||||||||
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